Package: mrpheus
Title: Raw Physiological Signal Analysis for Biological Rhythms
        Research
Version: 0.1.4
Authors@R: c(
    person("Lucas", "França",
           email = "lucas.franca@northumbria.ac.uk",
           role = c("aut", "cre")),
    person("Mario", "Leocadio-Miguel",
           role = "aut",
           comment = c(ORCID = "0000-0002-7248-3529"))
  )
Description: Raw physiological signal analysis for biological rhythms
        research. Provides ingestion, artefact detection, event
        detection, and feature extraction for multi-modal physiological
        recordings including polysomnography (EDF/EDF+), MRI-concurrent
        physiological logs (Philips PMU), and EEG. Covers cardiac
        rhythm (QRS detection, HRV), respiratory rhythm (apnoea
        detection, respiratory indices), and neural oscillations (sleep
        spindles, slow oscillations, automatic AASM sleep staging via a
        pre-trained LightGBM model ported from YASA; Vallat & Walker,
        2021). Exports staged hypnograms to hypnor and derived metrics
        to syncR. Part of the Circadia Lab R ecosystem at Northumbria
        University.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
URL: https://mrpheus.circadia-lab.uk,
        https://github.com/circadia-bio/mrpheus
BugReports: https://github.com/circadia-bio/mrpheus/issues
Depends: R (>= 4.1.0)
Imports: fastICA (>= 1.2-0), edfReader (>= 1.2.1), gsignal (>= 0.3.5),
        pracma (>= 2.4.2), lightgbm (>= 4.0.0), dplyr (>= 1.1.0),
        tibble (>= 3.2.0), cli (>= 3.6.0), rlang (>= 1.1.0), Rcpp (>=
        1.0.10)
LinkingTo: Rcpp
Suggests: scales, testthat (>= 3.0.0), knitr, rmarkdown, withr, ggplot2
        (>= 3.4.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
Config/Needs/website: tidyr, ggplot2, scales
Repository: https://circadia-bio.r-universe.dev
Date/Publication: 2026-07-08 22:16:43 UTC
RemoteUrl: https://github.com/circadia-bio/mrpheus
RemoteRef: v0.1.4
RemoteSha: eac294b569229c02144e5186599d369edcad3c07
NeedsCompilation: yes
Packaged: 2026-11-02 09:46:34 UTC; root
Author: Lucas França [aut, cre],
  Mario Leocadio-Miguel [aut] (ORCID:
    <https://orcid.org/0000-0002-7248-3529>)
Maintainer: Lucas França <lucas.franca@northumbria.ac.uk>